Proline Proline is a landmark software suite for quantitative proteomics allowing to collect, process, visualize and publish proteomics datasets [Bouyssié et al., Bioinformatics in revision 2019]. Proline is developed in partnership with ProFI members (Strasbourg, Toulouse) under the coordination of EDyP. Compared to existing tools, it combines in a unique software environment, efficient processing algorithms […]
ProStaR ProStaR, is devoted to the statistical analysis of label-free quantitative proteomics data produced by bottom-up LC-MS/MS experiments. Prostar project has two complementary aspects. First, it gathers numerous independent methodological research works in biostatistics to improve the processing of label-free relative quantitative proteomics data. These improvements concerns both specific processing steps (such as missing value […]
ProteoRE The development of ProteoRE (Proteomics Research Environment) is an online research service to assist biologists/clinicians in the interpretation of their “Omics” data, including proteomics data. With the increased capabilities to produce MS-based proteomics data, the bottleneck has shifted to the functional analysis of specific proteins to the full exploitation of large protein lists by […]