Publications

Publications 2022

Capizzi, M., Carpentier, R., Denarier, E., Adrait, A., Kassem, R., Mapelli, M., Couté, Y., & Humbert, S. (2022). Developmental defects in Huntington’s disease show that axonal growth and microtubule reorganization require NUMA1. Neuron, 110(1), 36-50.e5. https://doi.org/10.1016/j.neuron.2021.10.033
Permiakova, O., & Burger, T. (2022). Sketched Stochastic Dictionary Learning for large‐scale data and application to high‐throughput mass spectrometry. Statistical Analysis and Data Mining: The ASA Data Science Journal, 15(1), 43–56. https://doi.org/10.1002/sam.11542
Rezaei-Gazik, M., Vargas, A., Amiri-Yekta, A., Vitte, A.-L., Akbari, A., Barral, S., Esmaeili, V., Chuffart, F., Sadighi-Gilani, M. A., Couté, Y., Eftekhari-Yazdi, P., Khochbin, S., Rousseaux, S., & Totonchi, M. (2022). Direct visualization of pre-protamine 2 detects protamine assembly failures and predicts ICSI success. Molecular Human Reproduction, 28(2), gaac004. https://doi.org/10.1093/molehr/gaac004
Caron, M., Gely, L., Garvis, S., Adrait, A., Couté, Y., Palladino, F., & Fabrizio, P. (2022). Loss of SET1/COMPASS methyltransferase activity reduces lifespan and fertility in Caenorhabditis elegans. Life Science Alliance, 5(3), e202101140. https://doi.org/10.26508/lsa.202101140
Barnault, R., Verzeroli, C., Fournier, C., Michelet, M., Redavid, A. R., Chicherova, I., Plissonnier, M.-L., Adrait, A., Khomich, O., Chapus, F., Richaud, M., Hervieu, M., Reiterer, V., Centonze, F. G., Lucifora, J., Bartosch, B., Rivoire, M., Farhan, H., Couté, Y., … Parent, R. (2022). Hepatic inflammation elicits production of proinflammatory netrin-1 through exclusive activation of translation. Hepatology (Baltimore, Md.). https://doi.org/10.1002/hep.32446
Gfrerer, S., Winkler, D., Novion Ducassou, J., Couté, Y., Rachel, R., & Gescher, J. (2022). A Micrarchaeon Isolate Is Covered by a Proteinaceous S-Layer. Applied and Environmental Microbiology, 88(5), e01553-21. https://doi.org/10.1128/aem.01553-21
Ben Amar, D., Thoinet, K., Villalard, B., Imbaud, O., Costechareyre, C., Jarrosson, L., Reynaud, F., Novion Ducassou, J., Couté, Y., Brunet, J.-F., Combaret, V., Corradini, N., Delloye-Bourgeois, C., & Castellani, V. (2022). Environmental cues from neural crest derivatives act as metastatic triggers in an embryonic neuroblastoma model. Nature Communications, 13(1), 2549. https://doi.org/10.1038/s41467-022-30237-3
Vigetti, L., Labouré, T., Roumégous, C., Cannella, D., Touquet, B., Mayer, C., Couté, Y., Frénal, K., Tardieux, I., & Renesto, P. (2022). The BCC7 Protein Contributes to the Toxoplasma Basal Pole by Interfacing between the MyoC Motor and the IMC Membrane Network. International Journal of Molecular Sciences, 23(11), 5995. https://doi.org/10.3390/ijms23115995
Nyonda, M. A., Boyer, J.-B., Belmudes, L., Krishnan, A., Pino, P., Couté, Y., Brochet, M., Meinnel, T., Soldati-Favre, D., & Giglione, C. (2022). N-Acetylation of secreted proteins is widespread in Apicomplexa and independent of acetyl-CoA ER-transporter AT1. Journal of Cell Science, jcs.259811. https://doi.org/10.1242/jcs.259811
Job, V., Gomez-Valero, L., Renier, A., Rusniok, C., Bouillot, S., Chenal-Francisque, V., Gueguen, E., Adrait, A., Robert-Genthon, M., Jeannot, K., Panchev, P., Elsen, S., Fauvarque, M.-O., Couté, Y., Buchrieser, C., & Attrée, I. (2022). Genomic erosion and horizontal gene transfer shape functional differences of the ExlA toxin in Pseudomonas spp. IScience, 104596. https://doi.org/10.1016/j.isci.2022.104596
Abulfaraj, A. A., Alhoraibi, H. M., Mariappan, K., Bigeard, J., Zhang, H., Almeida-Trapp, M., Artyukh, O., Abdulhakim, F., Parween, S., Pflieger, D., Blilou, I., Hirt, H., & Rayapuram, N. (2022). Analysis of the Arabidopsis coilin mutant reveals a positive role of AtCOILIN in plant immunity. Plant Physiology, kiac280. https://doi.org/10.1093/plphys/kiac280
Burger, T. (2022). Can Omics Biology Go Subjective because of Artificial Intelligence? A Comment on “Challenges and Opportunities for Bayesian Statistics in Proteomics” by Crook et al. Journal of Proteome Research, acs.jproteome.2c00161. https://doi.org/10.1021/acs.jproteome.2c00161
Fancello, L., & Burger, T. (2022). An analysis of proteogenomics and how and when transcriptome-informed reduction of protein databases can enhance eukaryotic proteomics. Genome Biology, 23(1), 132. https://doi.org/10.1186/s13059-022-02701-2
Dragic, H., Barthelaix, A., Duret, C., Le Goupil, S., Laprade, H., Martin, S., Brugière, S., Couté, Y., Machon, C., Guitton, J., Rudewicz, J., Hofman, P., Lebecque, S., Chaveroux, C., Ferraro-Peyret, C., Renno, T., & Manié, S. N. (2022). The hexosamine pathway and coat complex II promote malignant adaptation to nutrient scarcity. Life Science Alliance, 5(7), e202101334. https://doi.org/10.26508/lsa.202101334