Publications 2017

El Kennani, S., Adrait, A., Shaytan, A. K., Khochbin, S., Bruley, C., Panchenko, A. R., … Govin, J. (2017). MS_HistoneDB, a manually curated resource for proteomic analysis of human and mouse histones. Epigenetics & Chromatin, 10, 2.
Alfieri, A., Sorokina, O., Adrait, A., Angelini, C., Russo, I., Morellato, A., … Defilippi, P. (2017). Synaptic Interactome Mining Reveals p140Cap as a New Hub for PSD Proteins Involved in Psychiatric and Neurological Disorders. Frontiers in Molecular Neuroscience, 10, 212.
Vizcaíno, J. A., Walzer, M., Jiménez, R. C., Bittremieux, W., Bouyssié, D., Carapito, C., … Kohlbacher, O. (2017). A community proposal to integrate proteomics activities in ELIXIR. F1000Research, 6.
Boruc, J., Weimer, A. K., Stoppin-Mellet, V., Mylle, E., Kosetsu, K., Cedeño, C., … Van Damme, D. (2017). Phosphorylation of MAP65-1 by Arabidopsis Aurora Kinases Is Required for Efficient Cell Cycle Progression. Plant Physiology, 173(1), 582–599.
García-Oliver, E., Ramus, C., Perot, J., Arlotto, M., Champleboux, M., Mietton, F., … Govin, J. (2017). Bdf1 Bromodomains Are Essential for Meiosis and the Expression of Meiotic-Specific Genes. PLoS Genetics, 13(1), e1006541.
Gilquin, B., Jaquinod, M., Louwagie, M., Kieffer-Jaquinod, S., Kraut, A., Ferro, M., … Brun, V. (2017). A proteomics assay to detect eight CBRN-relevant toxins in food. Proteomics, 17(1–2).
Wieczorek, S., Combes, F., Lazar, C., Giai Gianetto, Q., Gatto, L., Dorffer, A., … Burger, T. (2017). DAPAR & ProStaR: software to perform statistical analyses in quantitative discovery proteomics. Bioinformatics (Oxford, England), 33(1), 135–136.
Do, L.-D., Chanson, E., Desestret, V., Joubert, B., Ducray, F., Brugière, S., … Honnorat, J. (2017). Characteristics in limbic encephalitis with anti-adenylate kinase 5 autoantibodies. Neurology, 88(6), 514–524.
van Lis, R., Popek, M., Couté, Y., Kosta, A., Drapier, D., Nitschke, W., & Atteia, A. (2017). Concerted Up-regulation of Aldehyde/Alcohol Dehydrogenase (ADHE) and Starch in Chlamydomonas reinhardtii Increases Survival under Dark Anoxia. The Journal of Biological Chemistry, 292(6), 2395–2410.
Gilquin, B., Louwagie, M., Jaquinod, M., Cez, A., Picard, G., El Kholy, L., … Brun, V. (2017). Multiplex and accurate quantification of acute kidney injury biomarker candidates in urine using Protein Standard Absolute Quantification (PSAQ) and targeted proteomics. Talanta, 164, 77–84.
Barral, S., Morozumi, Y., Tanaka, H., Montellier, E., Govin, J., de Dieuleveult, M., … Khochbin, S. (2017). Histone Variant H2A.L.2 Guides Transition Protein-Dependent Protamine Assembly in Male Germ Cells. Molecular Cell, 66(1), 89-101.e8.
Duriez, E., Masselon, C. D., Mesmin, C., Court, M., Demeure, K., Allory, Y., … Domon, B. (2017). Large-Scale SRM Screen of Urothelial Bladder Cancer Candidate Biomarkers in Urine. Journal of Proteome Research, 16(4), 1617–1631.
Fabre, E., Jeudy, S., Santini, S., Legendre, M., Trauchessec, M., Couté, Y., … Abergel, C. (2017). Noumeavirus replication relies on a transient remote control of the host nucleus. Nature Communications, 8, 15087.
Mietton, F., Ferri, E., Champleboux, M., Zala, N., Maubon, D., Zhou, Y., … Petosa, C. (2017). Selective BET bromodomain inhibition as an antifungal therapeutic strategy. Nature Communications, 8, 15482.
Gloaguen, P., Bournais, S., Alban, C., Ravanel, S., Seigneurin-Berny, D., Matringe, M., … Curien, G. (2017). ChloroKB: A Web Application for the Integration of Knowledge Related to Chloroplast Metabolic Network. Plant Physiology, 174(2), 922–934.
Tarasova, I. A., Masselon, C. D., Gorshkov, A. V., & Gorshkov, M. V. (2017). Reply to “Comparison of peptide retention prediction algorithm in reversed-phase chromatography. Comment on ‘Predictive chromatography of peptides and proteins as a complementary tool for proteomics’”, by O. V. Krokhin, Analyst, 2017, 142, DOI: 10.1039/c6an02510b. The Analyst, 142(11), 2052–2053.
Bartoli, J., My, L., Belmudes, L., Couté, Y., Viala, J. P., & Bouveret, E. (2017). The Long Hunt for pssR-Looking for a Phospholipid Synthesis Transcriptional Regulator, Finding the Ribosome. Journal of Bacteriology, 199(14).
Maes, P., Donadio-Andréi, S., Louwagie, M., Couté, Y., Picard, G., Lacoste, C., … Brun, V. (2017). Introducing plasma/serum glycodepletion for the targeted proteomics analysis of cytolysis biomarkers. Talanta, 170, 473–480.
Sorigué, D., Légeret, B., Cuiné, S., Blangy, S., Moulin, S., Billon, E., … Beisson, F. (2017). An algal photoenzyme converts fatty acids to hydrocarbons. Science (New York, N.Y.), 357(6354), 903–907.
Carapito, C., Duek, P., Macron, C., Seffals, M., Rondel, K., Delalande, F., … Pineau, C. (2017). Validating Missing Proteins in Human Sperm Cells by Targeted Mass-Spectrometry- and Antibody-based Methods. Journal of Proteome Research.
Sonntag, E., Milbradt, J., Svrlanska, A., Strojan, H., Häge, S., Kraut, A., … Marschall, M. (2017). Protein kinases responsible for the phosphorylation of the nuclear egress core complex of human cytomegalovirus. The Journal of General Virology, 98(10), 2569–2581.
Sindikubwabo, F., Ding, S., Hussain, T., Ortet, P., Barakat, M., Baumgarten, S., … Hakimi, M.-A. (2017). Modifications at K31 on the lateral surface of histone H4 contribute to genome structure and expression in apicomplexan parasites. ELife, 6.
Aillaud, C., Bosc, C., Peris, L., Bosson, A., Heemeryck, P., Van Dijk, J., … Moutin, M.-J. (2017). Vasohibins/SVBP are tubulin carboxypeptidases (TCP) that regulate neuron differentiation. Science (New York, N.Y.).
Beaumel, S., Picciocchi, A., Debeurme, F., Vivès, C., Hesse, A.-M., Ferro, M., … Stasia, M. J. (2017). Down-regulation of NOX2 activity in phagocytes mediated by ATM-kinase dependent phosphorylation. Free Radical Biology & Medicine, 113, 1–15.
Erales, J., Marchand, V., Panthu, B., Gillot, S., Belin, S., Ghayad, S. E., … Diaz, J.-J. (2017). Evidence for rRNA 2’-O-methylation plasticity: Control of intrinsic translational capabilities of human ribosomes. Proceedings of the National Academy of Sciences of the United States of America, 114(49), 12934–12939.
Arvin-Berod, M., Desroches-Castan, A., Bonte, S., Brugière, S., Couté, Y., Guyon, L., … Demeunynck, M. (2017). Indolizine-Based Scaffolds as Efficient and Versatile Tools: Application to the Synthesis of Biotin-Tagged Antiangiogenic Drugs. ACS Omega, 2(12), 9221–9230.