{"id":375,"date":"2019-10-24T08:57:19","date_gmt":"2019-10-24T06:57:19","guid":{"rendered":"https:\/\/www.edyp.fr\/web\/?p=375"},"modified":"2025-06-10T16:50:50","modified_gmt":"2025-06-10T14:50:50","slug":"prostar","status":"publish","type":"post","link":"https:\/\/www.edyp.fr\/web\/2019\/10\/24\/prostar\/","title":{"rendered":"ProStaR"},"content":{"rendered":"\t\t<div data-elementor-type=\"wp-post\" data-elementor-id=\"375\" class=\"elementor elementor-375\">\n\t\t\t\t\t\t<section class=\"elementor-section elementor-top-section elementor-element elementor-element-1061609 elementor-section-boxed elementor-section-height-default elementor-section-height-default\" data-id=\"1061609\" data-element_type=\"section\">\n\t\t\t\t\t\t<div class=\"elementor-container elementor-column-gap-default\">\n\t\t\t\t\t<div class=\"elementor-column elementor-col-100 elementor-top-column elementor-element elementor-element-5096e05\" data-id=\"5096e05\" data-element_type=\"column\">\n\t\t\t<div class=\"elementor-widget-wrap elementor-element-populated\">\n\t\t\t\t\t\t<div class=\"elementor-element elementor-element-305c82e elementor-widget elementor-widget-heading\" data-id=\"305c82e\" data-element_type=\"widget\" data-widget_type=\"heading.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t<h2 class=\"elementor-heading-title elementor-size-default\"><span class=\"ez-toc-section\" id=\"ProStaR\"><\/span>ProStaR<span class=\"ez-toc-section-end\"><\/span><\/h2>\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-0549b64 elementor-widget elementor-widget-text-editor\" data-id=\"0549b64\" data-element_type=\"widget\" data-widget_type=\"text-editor.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t<p>ProStaR, is devoted to the statistical analysis of label-free quantitative proteomics data produced by bottom-up LC-MS\/MS experiments. Prostar project has two complementary aspects. <\/p>\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-8d42ce6 elementor-widget elementor-widget-image\" data-id=\"8d42ce6\" data-element_type=\"widget\" data-widget_type=\"image.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<img fetchpriority=\"high\" decoding=\"async\" width=\"477\" height=\"343\" src=\"https:\/\/www.edyp.fr\/web\/wp-content\/uploads\/2019\/10\/prostar.png\" class=\"attachment-large size-large wp-image-381\" alt=\"\" srcset=\"https:\/\/www.edyp.fr\/web\/wp-content\/uploads\/2019\/10\/prostar.png 477w, https:\/\/www.edyp.fr\/web\/wp-content\/uploads\/2019\/10\/prostar-300x216.png 300w, https:\/\/www.edyp.fr\/web\/wp-content\/uploads\/2019\/10\/prostar-230x165.png 230w, https:\/\/www.edyp.fr\/web\/wp-content\/uploads\/2019\/10\/prostar-350x252.png 350w\" sizes=\"(max-width: 477px) 100vw, 477px\" \/>\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-96ecf7e elementor-widget elementor-widget-text-editor\" data-id=\"96ecf7e\" data-element_type=\"widget\" data-widget_type=\"text-editor.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t<p>First, it gathers numerous independent methodological research works in biostatistics to improve the processing of label-free relative quantitative proteomics data. These improvements concerns both specific processing steps (such as missing value imputation, null hypothesis significance testing, false discovery rate control, etc.) and their organization into coherent pipelines [Wieczoreck et al., MiMB 2019; Jacob et al., Biostatistics 2018; Wieczoreck et al., Bioinformatics 2017; Burger, Journal of Proteome Research 2017; Giai Gianetto et al., Proteomics 2016; Lazar et al., Journal of Proteome Research 2016].<\/p><p>Second, ProStaR is a platform that is used on a daily basis by proteomics researchers and engineers to investigate their data. The software tool is built on R biostatistics routines (either pre-existing package or the aforementioned ProStaR research results) and web-based graphical user interfaces (Shiny technology). ProStaR is distributed through the BioConductor initiative, or via the project webpage www.prostar-proteomics.org. Over the last four years, Prostar have been downloaded in average 100 times\/month (unique IPs).<\/p>\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/section>\n\t\t\t\t<section class=\"elementor-section elementor-top-section elementor-element elementor-element-57a506b elementor-section-boxed elementor-section-height-default elementor-section-height-default\" data-id=\"57a506b\" data-element_type=\"section\">\n\t\t\t\t\t\t<div class=\"elementor-container elementor-column-gap-default\">\n\t\t\t\t\t<div class=\"elementor-column elementor-col-100 elementor-top-column elementor-element elementor-element-0df32c7\" data-id=\"0df32c7\" data-element_type=\"column\">\n\t\t\t<div class=\"elementor-widget-wrap elementor-element-populated\">\n\t\t\t\t\t\t<div class=\"elementor-element elementor-element-3700088 elementor-widget elementor-widget-heading\" data-id=\"3700088\" data-element_type=\"widget\" data-widget_type=\"heading.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t<h4 class=\"elementor-heading-title elementor-size-default\"><span class=\"ez-toc-section\" id=\"EDyP_project_leader\"><\/span>EDyP project leader<span class=\"ez-toc-section-end\"><\/span><\/h4>\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-3f7f7e4 elementor-widget__width-initial eael-team-align-eael-team-align-default elementor-widget elementor-widget-eael-team-member\" data-id=\"3f7f7e4\" data-element_type=\"widget\" data-widget_type=\"eael-team-member.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\n\n\t<div id=\"eael-team-member-3f7f7e4\" class=\"eael-team-item eael-team-members-simple \">\n\t\t<div class=\"eael-team-item-inner\">\n\t\t\t<div class=\"eael-team-image\">\n\t\t\t\t<figure>\n\t\t\t\t\t\t\t\t\t<\/figure>\n\t\t\t\t\n\t\t\t\t\n\t\t\t<\/div>\n\n\t\t\t<div class=\"eael-team-content\">\n\t\t\t\t<h2 class=\"eael-team-member-name\"><span class=\"ez-toc-section\" id=\"Thomas_Burger\"><\/span>Thomas Burger<span class=\"ez-toc-section-end\"><\/span><\/h2><h3 class=\"eael-team-member-position\"><span class=\"ez-toc-section\" id=\"CNRS_Researcher\"><\/span>CNRS Researcher<span class=\"ez-toc-section-end\"><\/span><\/h3>\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<ul class=\"eael-team-member-social-profiles\">\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<li class=\"eael-team-member-social-link\">\n\t\t\t\t\t\t\t\t\t\t<a href=\"https:\/\/orcid.org\/0000-0003-3539-3564\" target=\"_blank\">\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<i aria-hidden=\"true\" class=\"eci  fontello-orcid-orcid-icon\"><\/i>\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<\/a>\n\t\t\t\t\t\t\t\t\t<\/li>\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<li class=\"eael-team-member-social-link\">\n\t\t\t\t\t\t\t\t\t\t<a href=\"\" target=\"_blank\">\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<i aria-hidden=\"true\" class=\"fas fa-graduation-cap\"><\/i>\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<\/a>\n\t\t\t\t\t\t\t\t\t<\/li>\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<\/ul>\n\t\t\t\t\t\t\t\t\t\t<p class=\"eael-team-text\"><\/p>\n\t\t\t\t\t\t\t<\/div>\n\t\t<\/div>\n\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/section>\n\t\t\t\t<section class=\"elementor-section elementor-top-section elementor-element elementor-element-12ba160 elementor-section-boxed elementor-section-height-default elementor-section-height-default\" data-id=\"12ba160\" data-element_type=\"section\">\n\t\t\t\t\t\t<div class=\"elementor-container elementor-column-gap-default\">\n\t\t\t\t\t<div class=\"elementor-column elementor-col-100 elementor-top-column elementor-element elementor-element-448d0c5\" data-id=\"448d0c5\" data-element_type=\"column\">\n\t\t\t<div class=\"elementor-widget-wrap elementor-element-populated\">\n\t\t\t\t\t\t<div class=\"elementor-element elementor-element-ad9ed5f elementor-widget elementor-widget-text-editor\" data-id=\"ad9ed5f\" data-element_type=\"widget\" data-widget_type=\"text-editor.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t<p><em>Image credit: <a href=\"https:\/\/pixabay.com\/fr\/users\/LittleAngell-2634495\/?utm_source=link-attribution&amp;utm_medium=referral&amp;utm_campaign=image&amp;utm_content=1419606\">LittleAngell<\/a> de <a href=\"https:\/\/pixabay.com\/fr\/?utm_source=link-attribution&amp;utm_medium=referral&amp;utm_campaign=image&amp;utm_content=1419606\">Pixabay<\/a><\/em><\/p>\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/section>\n\t\t\t\t<\/div>\n\t\t","protected":false},"excerpt":{"rendered":"<p>ProStaR ProStaR, is devoted to the statistical analysis of label-free quantitative proteomics data produced by bottom-up LC-MS\/MS experiments. Prostar project has two [&hellip;]<\/p>\n","protected":false},"author":1,"featured_media":704,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"_themeisle_gutenberg_block_has_review":false,"footnotes":""},"categories":[9],"tags":[44],"class_list":["post-375","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-data-science","tag-projects"],"_links":{"self":[{"href":"https:\/\/www.edyp.fr\/web\/wp-json\/wp\/v2\/posts\/375","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.edyp.fr\/web\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.edyp.fr\/web\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.edyp.fr\/web\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/www.edyp.fr\/web\/wp-json\/wp\/v2\/comments?post=375"}],"version-history":[{"count":9,"href":"https:\/\/www.edyp.fr\/web\/wp-json\/wp\/v2\/posts\/375\/revisions"}],"predecessor-version":[{"id":2165,"href":"https:\/\/www.edyp.fr\/web\/wp-json\/wp\/v2\/posts\/375\/revisions\/2165"}],"wp:featuredmedia":[{"embeddable":true,"href":"https:\/\/www.edyp.fr\/web\/wp-json\/wp\/v2\/media\/704"}],"wp:attachment":[{"href":"https:\/\/www.edyp.fr\/web\/wp-json\/wp\/v2\/media?parent=375"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.edyp.fr\/web\/wp-json\/wp\/v2\/categories?post=375"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.edyp.fr\/web\/wp-json\/wp\/v2\/tags?post=375"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}